SweetBiOmics aims to create and integrate cutting edge genomic, epigenetic, transcriptomic, proteomic, metabolomic and phenotypic data with advanced statistical and bioinformatics approaches focused on the analysis of the entire Greek sweet cherry (Prunus avium L.) germplasm collection.
SweetBiOmics will include a significant outreach and extension component to communicate its progress and results. The outreach plan is focused on developing materials and programming for three audiences: (a) cherry growers and processors who bring cherry products to consumers, (b) cherry breeders and geneticists, and (c) the general consuming public.
January
12:00
January
12:00
May
12:00
March
14:20
Shirasawa K. et. al., DNA Res. 2017 Oct 1;24(5):499-508
We determined the genome sequence of sweet cherry (Prunus avium) using next-generation sequencing technology. The total length of the assembled sequences was 272.4 Mb, consisting of 10,148 scaffold sequences with an N50 length of 219.6 kb. The sequences covered 77.8% of the 352.9 Mb…
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March
14:20
(Kentaro Ono Takashi Akagi Takuya Morimoto Ana Wünsch…
The S-RNase-based gametophytic self-incompatibility (GSI) reproduction barrier is important for maintaining genetic diversity in species of the families Solanaceae, Plantaginaceae and Rosaceae. Among the plant taxa with S-RNase-based GSI, Prunus species in the family Rosaceae exhibit Prunus-specific…
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March
14:20
Aranzana, Maria José, Véronique Decroocq, Elisabeth…
Prior to the availability of whole-genome sequences, our understanding of the structural and functional aspects of Prunus tree genomes was limited mostly to molecular genetic mapping of important traits and development of EST resources. With public release…
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March
14:20
(Shirasawa et. al., DNA Research, Volume 24, Issue…
Shirasawa et. al. determined the genome sequence of sweet cherry (Prunus avium) using next-generation sequencing technology. The total length of the assembled sequences was 272.4 Mb, consisting of 10,148 scaffold sequences with an N50 length of 219.6 kb. The sequences covered 77.8% of the 352.9 Mb…
Read more
March
14:20
Jiawei Wang et. al., Hortic Res 7, 122 (2020)
Sweet cherry (Prunus avium) is an economically significant fruit species in the genus Prunus. However, in contrast to other important fruit trees in this genus, only one draft genome assembly is available for sweet cherry, which was assembled using…
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March
14:20
Sara Pinosio et. al., The Plant Journal (2020)
Sweet cherry (Prunus avium L.) trees are both economically important fruit crops but also important components of natural forest ecosystems in Europe, Asia and Africa. Wild and domesticated trees currently coexist in the same geographic areas with important questions arising…
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This project has received funding from the Hellenic Foundation for Research and Innovation (HFRI) and the General Secretariat for Research and Technology (GSRT), under grant agreement No. 148.
